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SAS-GeneticsTM 9.1 User's Guide

IP.com Disclosure Number: IPCOM000243356D
Original Publication Date: 2004-Dec-31
Included in the Prior Art Database: 2015-Sep-19
Document File: 204 page(s) / 1M

Publishing Venue

SAS Institute Inc.

This text was extracted from a PDF file.
This is the abbreviated version, containing approximately 3% of the total text.

Page 01 of 204

SAS/GeneticsTM 9.1

User's Guide



Page 02 of 204

The correct bibliographic citation for this manual is as follows: SAS Institute Inc. 2004. SAS/GeneticsTM 9.1 User's Guide.Cary, NC: SAS Institute Inc.

SAS/GeneticsTM 9.1 User's Guide

Copyright © 2004, SAS Institute Inc., Cary, NC, USA

ISBN 1-59047-233-0

All rights reserved. Produced in the United States of America. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, or otherwise, without the prior written permission of the publisher, SAS Institute Inc.

U.S. Government Restricted Rights Notice: Use, duplication, or disclosure of this software and related documentation by the U.S. government is subject to the Agreement with SAS Institute and the restrictions set forth in FAR 52.227-19, Commercial Computer Software-Restricted Rights (June 1987).

SAS Institute Inc., SAS Campus Drive, Cary, North Carolina 27513.

1st printing, January 2004

SAS Publishing provides a complete selection of books and electronic products to help customers use SAS software to its fullest potential. For more information about our e-books, e-learning products, CDs, and hard-copy books, visit the SAS Publishing Web site at support.sas.com/pubs or call 1-800-727-3228.

SAS® and all other SAS Institute Inc. product or service names are registered trademarks or trademarks of SAS Institute Inc. in the USA and other countries. ® indicates USA registration.

Other brand and product names are trademarks of their respective companies.


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Contents

What's New in SAS/Genetics 9 and 9.1 . . . . . . . . . . . . . . . . . . . . . . . . . . 1

Chapter 1. Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7

Chapter 2. The ALLELE Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17

Chapter 3. The CASECONTROL Procedure . . . . . . . . . . . . . . . . . . . . . . . 45

Chapter 4. The FAMILY Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61

Chapter 5. The HAPLOTYPE Procedure . . . . . . . . . . . . . . . . . . . . . . . . . 83

Chapter 6. The HTSNP Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123

Chapter 7. The INBREED Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . 139

Chapter 8. The PSMOOTH Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . 165

Chapter 9. The TPLOT Macro . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 179

Subject Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 187

Syntax Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 191


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Acknowledgments

Credits

Documentation

Writing

Wendy Czika and Xiang Yu

Editing

Virginia Clark and Rob Pratt

Technical Review Yujun Shao and Russell D. Wolfinger

Documentation Production Tim Arnold

Software

The procedures in SAS/Genetics softwa...